Episodes – 24 shown
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 Title
The final episode leads to the normal end game; extra episodes require the Paradox Scope to unlock
Name
- Overture
Episode 1 A World Without Cocoon
Episode 2 Unseen Intruder
Episode 3 Part 1 Prophecy of Hope
- Cyber Wars
Episode 3 Part 2 Oathbrand
- Perpetual Battlefield
- Bounty Hunters
- Rubies of Grief
- Vanishing Soldiers
- Chaos Crystal
Episode 4 Skyborne Paradise
- School of Flan
- The Unfinished Road
Episode 5 Time in Motion
The Last Episode The Promised Future
- A Giant Mistake
- Vanille's Truth
- Mischievous Mog's Marvelous Plan with Flan
- Test Subjects
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